Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933196.1_cds_XP_016479575.1_71101
CDS Infomation

[gene=LOC107800847] [db_xref=GeneID:107800847] [protein=U-box domain-containing protein 35-like] [protein_id=XP_016479575.1] [location=complement(join(5438..6148,6745..7173,7979..8074,8177..8429,9367..9573,9667..9788,10213..10307,10937..11099))] [gbkey=CDS]
Sequence

ATGCCTTTGTCATTTTCGTCGGATGATGGTAGCCACCCCACCATTGTGGCCATTGATAAA
GACAAGCACAGCGCCTCTGCTGTCAAATGGGCTGTTGATCATCTCGTGATGAGCAATCCG
ACGCTTGTGTTAGTCCATGTTCGGATAAAGAACTCAACAAATCAGAATGGTGTTGTTCAA
GGTTCAAATCGCGGATTGAGTGATCAAGATACTCCTAAGGTCTTTACACCTTTTAGGGCT
TACTCTGCACGTAAAGGGATAGCAGTGAAGGAGGTTGTCATTGAGGATATTGAAGTGTCT
AAGGGACTTCTAGACTATATTAACAGCCACCGCGTCACCAACATTGTTCTTGGTGCATCA
TCAAGGAGTGCTCTATCCAGGAAATTTTGGAGTCATGATGTGCCAACTATCATAAACAAG
TCTGCACCAGATTTCTGTACTGTATACGTGATTTCGAAAGGAAAGCAACAGTCAGTCAGA
CCAGCAGCAAAACCTTTTGCTAGTTCTTTGTCATCAACGCTACCATCTTCCCAACCGTGG
TCAGCAGCTAGGCTAAGTAATTACTCTGAATCATCAGATGTATCCAGGTCAGTATATACG
AGGCCAGAGCAAAATATTGTAGGTTCTGAAATGATGAAGCCCAAAATTGGACCATCTAAT
GCATCAATGGACAATCTTGACGTTCATACTAAAGAGCCCAAGAATTCATATAGCCGCAGT
TCTCCGTCTGATGATAGAGGTCTCTTTGCACCTCTTAGCCATGGATCAGTGGATATCACA
ACTCAAAATCTTGATTTCACTCAAGTTTCAGTAAAAGACAATTGTTGCTCCTCATCTTCA
TGGGAAGCTGAGATGAACAGATTAAAGCTAGAGCTAAGGCAAACCTTGGATATGTATAAC
ACAGCTTGCAAAGAAGCTGTCTCGGCAAACCAAACGGCTAAAGAGCTTCATCAATGGAAA
ATGGAAGAAGCAAGTAGGTTCAAACAAGCCCGTATTTCTGAAGAGGCAGCTCTCGCTAGT
GCTGAGATGGAAAAAGCGAAAGGCAGAGCTGCCATTGAAGCTGCTCAAAAAGCACAAAAG
TTGGCTGAGATAGAAGCAAAAAGAAGAAAGTATGCGGAGTTGAAGGCCAAGCGAGAGACA
GAAGAAAAGAATCTAGCATTAAATGATCTATCTCGGAGCGATCTCTGCTATAGGAAATAC
ACAATAGAAGAGATTGAGGCCGCCACCAAAAACTTCTCAAATTCAGAGAAGATTGGTGAA
GGTGGATATGGCCCTGTTTACAAAGCGAAACTTGATCACACACCCGTTGCCATTAAAGTT
CTGAGATCCGATGCTGCACAAGGGATGAAGCAGTTCAAGCAAGAGGTTCAAGTCCTCGGT
CTCATGAGGCACCCAAATATGGTTCTACTCTTAGGTGCATGTCCCGAGTATGGATGTTTA
GTTTATGAGTTCATGAATAATGGCAGTCTGGAAGATCGTCTGTTCCGGAAAGGTAACACC
CCTCCAATCCCATGGGAAATTCGGTTCAAAATTGCTGCTGAAATTGCTACGGGGCTCCTA
TTCCTTCACCAAGCAAAACCAGAACCTCTTGTCCATCGTGACCTTAAGCCAGCCAACATT
CTTTTAGACAGTAACTATTCGTGCAAAATAAGTGATGTTGGGTTGGCAAGGTTAGTTCCA
CCATCTGTAGCAGATTGTGTTACACAATATCACATGACTTCAGCTGCAGGAACGTTTTGT
TACATTGATCCTGAATATCAACAAACAGGAAAGTTAGGGACTAAATCAGATATATATTCA
CTTGGTGTGATGTTGCTCCAAATTATTACTGCAAGGCCCCCGATGGGTTTAACACATCAC
GTCGAGAGGGCCATCGAGAACGGAACATTTGCAGACATACTAGATCCAACAGTGCCAAAC
TGGCCAATGGAAGAGACTCTTAACTATGCAAAATTGTCACTCAAGTGTGCTGAGCTGCGG
AAGAAAGATCGACCTGATCTTGGTTCGGTCATATTGCCTGAGCTTAATAAGCTTAAAGAA
CTCGGAATGAATAGCAAGCCAAGTACAGACTCTTAA

Peptide Sequence

PEP ID

XP_016479575.1
PEP Infomation

PREDICTED: U-box domain-containing protein 35-like [Nicotiana tabacum]
Sequence

MPLSFSSDDGSHPTIVAIDKDKHSASAVKWAVDHLVMSNPTLVLVHVRIKNSTNQNGVVQ
GSNRGLSDQDTPKVFTPFRAYSARKGIAVKEVVIEDIEVSKGLLDYINSHRVTNIVLGAS
SRSALSRKFWSHDVPTIINKSAPDFCTVYVISKGKQQSVRPAAKPFASSLSSTLPSSQPW
SAARLSNYSESSDVSRSVYTRPEQNIVGSEMMKPKIGPSNASMDNLDVHTKEPKNSYSRS
SPSDDRGLFAPLSHGSVDITTQNLDFTQVSVKDNCCSSSSWEAEMNRLKLELRQTLDMYN
TACKEAVSANQTAKELHQWKMEEASRFKQARISEEAALASAEMEKAKGRAAIEAAQKAQK
LAEIEAKRRKYAELKAKRETEEKNLALNDLSRSDLCYRKYTIEEIEAATKNFSNSEKIGE
GGYGPVYKAKLDHTPVAIKVLRSDAAQGMKQFKQEVQVLGLMRHPNMVLLLGACPEYGCL
VYEFMNNGSLEDRLFRKGNTPPIPWEIRFKIAAEIATGLLFLHQAKPEPLVHRDLKPANI
LLDSNYSCKISDVGLARLVPPSVADCVTQYHMTSAAGTFCYIDPEYQQTGKLGTKSDIYS
LGVMLLQIITARPPMGLTHHVERAIENGTFADILDPTVPNWPMEETLNYAKLSLKCAELR
KKDRPDLGSVILPELNKLKELGMNSKPSTDS

Transcript Sequence

Gene sequence data has not been registered.